STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087335_00535Unannotated protein. (189 aa)    
Predicted Functional Partners:
GCA_002087335_00536
Unannotated protein.
     0.994
GCA_002087335_00532
Unannotated protein.
 
 
 0.957
GCA_002087335_00534
Unannotated protein.
    
0.953
GCA_002087335_00531
Unannotated protein.
 
 
 0.943
GCA_002087335_03335
Unannotated protein.
 
 
 0.902
GCA_002087335_00533
Unannotated protein.
 
     0.891
GCA_002087335_03334
Unannotated protein.
 
 
 0.876
GCA_002087335_00537
Unannotated protein.
 
     0.833
GCA_002087335_04530
Unannotated protein.
 
 
 0.787
GCA_002087335_03336
Unannotated protein.
 
     0.771
Your Current Organism:
Pseudophaeobacter leonis
NCBI taxonomy Id: 1144477
Other names: CIP 110369, DSM 25627, P. leonis, Phaeobacter leonis, Phaeobacter leonis Gaboyer et al. 2013, Phaeobacter sp. 306, Pseudophaeobacter leonis (Gaboyer et al. 2013) Breider et al. 2014, UBOCC 3187, strain 306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.