STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087335_01059Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_002087335_01057
Unannotated protein.
 
 0.997
GCA_002087335_01058
Unannotated protein.
 
 0.997
GCA_002087335_01056
Unannotated protein.
 
 
 0.995
GCA_002087335_02024
Unannotated protein.
 0.992
GCA_002087335_02025
Unannotated protein.
 0.990
GCA_002087335_01055
Unannotated protein.
 
 0.986
GCA_002087335_04590
Unannotated protein.
   
  0.971
GCA_002087335_02753
Unannotated protein.
 
   
 
0.949
GCA_002087335_01105
Unannotated protein.
 
 0.940
GCA_002087335_04241
Unannotated protein.
 
 0.937
Your Current Organism:
Pseudophaeobacter leonis
NCBI taxonomy Id: 1144477
Other names: CIP 110369, DSM 25627, P. leonis, Phaeobacter leonis, Phaeobacter leonis Gaboyer et al. 2013, Phaeobacter sp. 306, Pseudophaeobacter leonis (Gaboyer et al. 2013) Breider et al. 2014, UBOCC 3187, strain 306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.