STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087335_01421Unannotated protein. (337 aa)    
Predicted Functional Partners:
GCA_002087335_03670
Unannotated protein.
  
 
 0.808
GCA_002087335_03671
Unannotated protein.
  
 
 0.808
GCA_002087335_02216
Unannotated protein.
      0.690
GCA_002087335_04292
Unannotated protein.
  
    0.586
GCA_002087335_04531
Unannotated protein.
  
  
 0.578
GCA_002087335_02158
Unannotated protein.
 
 
 0.563
GCA_002087335_02109
Unannotated protein.
 
  
 0.560
GCA_002087335_03376
Unannotated protein.
   
  
 0.560
GCA_002087335_01853
Unannotated protein.
  
 
 0.529
GCA_002087335_03777
Unannotated protein.
  
 
 0.529
Your Current Organism:
Pseudophaeobacter leonis
NCBI taxonomy Id: 1144477
Other names: CIP 110369, DSM 25627, P. leonis, Phaeobacter leonis, Phaeobacter leonis Gaboyer et al. 2013, Phaeobacter sp. 306, Pseudophaeobacter leonis (Gaboyer et al. 2013) Breider et al. 2014, UBOCC 3187, strain 306
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.