STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087335_02767Unannotated protein. (503 aa)    
Predicted Functional Partners:
GCA_002087335_00995
Unannotated protein.
 
 0.866
GCA_002087335_04630
Unannotated protein.
  
 0.852
GCA_002087335_00209
Unannotated protein.
  
  
 
0.849
GCA_002087335_03034
Unannotated protein.
  
 
 0.847
GCA_002087335_04518
Unannotated protein.
   
 0.847
GCA_002087335_01674
Unannotated protein.
  
 
  0.843
GCA_002087335_02504
Unannotated protein.
  
 0.837
GCA_002087335_03056
Unannotated protein.
  
 
 0.836
GCA_002087335_04632
Unannotated protein.
  
 0.834
GCA_002087335_03535
Unannotated protein.
   
  0.826
Your Current Organism:
Pseudophaeobacter leonis
NCBI taxonomy Id: 1144477
Other names: CIP 110369, DSM 25627, P. leonis, Phaeobacter leonis, Phaeobacter leonis Gaboyer et al. 2013, Phaeobacter sp. 306, Pseudophaeobacter leonis (Gaboyer et al. 2013) Breider et al. 2014, UBOCC 3187, strain 306
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.