STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087335_03433Unannotated protein. (347 aa)    
Predicted Functional Partners:
GCA_002087335_03428
Unannotated protein.
 
 0.998
GCA_002087335_03429
Unannotated protein.
 
 
 0.989
GCA_002087335_03436
Unannotated protein.
 
 
 0.988
GCA_002087335_03438
Unannotated protein.
 
 
 0.987
GCA_002087335_03437
Unannotated protein.
 
 
 0.986
GCA_002087335_03432
Unannotated protein.
     0.984
GCA_002087335_03434
Unannotated protein.
 
 
 0.980
GCA_002087335_03435
Unannotated protein.
 
 
 0.976
GCA_002087335_03423
Unannotated protein.
 
 
 0.970
GCA_002087335_03430
Unannotated protein.
  
 0.970
Your Current Organism:
Pseudophaeobacter leonis
NCBI taxonomy Id: 1144477
Other names: CIP 110369, DSM 25627, P. leonis, Phaeobacter leonis, Phaeobacter leonis Gaboyer et al. 2013, Phaeobacter sp. 306, Pseudophaeobacter leonis (Gaboyer et al. 2013) Breider et al. 2014, UBOCC 3187, strain 306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.