STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087335_03743Unannotated protein. (170 aa)    
Predicted Functional Partners:
GCA_002087335_03742
Unannotated protein.
 
 0.982
GCA_002087335_03744
Unannotated protein.
 
 
 0.954
GCA_002087335_03737
Unannotated protein.
 
   
 0.916
GCA_002087335_03738
Unannotated protein.
 
     0.898
GCA_002087335_03741
Unannotated protein.
 
     0.888
GCA_002087335_00199
Unannotated protein.
 
 0.884
GCA_002087335_00196
Unannotated protein.
 
 
 0.844
GCA_002087335_04507
Unannotated protein.
  
  
  0.812
GCA_002087335_00198
Unannotated protein.
 
 0.801
GCA_002087335_03739
Unannotated protein.
 
     0.801
Your Current Organism:
Pseudophaeobacter leonis
NCBI taxonomy Id: 1144477
Other names: CIP 110369, DSM 25627, P. leonis, Phaeobacter leonis, Phaeobacter leonis Gaboyer et al. 2013, Phaeobacter sp. 306, Pseudophaeobacter leonis (Gaboyer et al. 2013) Breider et al. 2014, UBOCC 3187, strain 306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.