STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087335_04437Unannotated protein. (370 aa)    
Predicted Functional Partners:
GCA_002087335_04436
Unannotated protein.
  0.984
GCA_002087335_04435
Unannotated protein.
 
 
  0.980
GCA_002087335_04438
Unannotated protein.
 
 
  0.956
GCA_002087335_02753
Unannotated protein.
 
  
 
0.943
GCA_002087335_04590
Unannotated protein.
 
 
 0.934
GCA_002087335_04153
Unannotated protein.
  
  
 
0.877
GCA_002087335_00041
Unannotated protein.
  
  
 
0.875
GCA_002087335_04154
Unannotated protein.
    
  0.874
GCA_002087335_02927
Unannotated protein.
   
  0.871
GCA_002087335_00468
Unannotated protein.
   
 
 
0.870
Your Current Organism:
Pseudophaeobacter leonis
NCBI taxonomy Id: 1144477
Other names: CIP 110369, DSM 25627, P. leonis, Phaeobacter leonis, Phaeobacter leonis Gaboyer et al. 2013, Phaeobacter sp. 306, Pseudophaeobacter leonis (Gaboyer et al. 2013) Breider et al. 2014, UBOCC 3187, strain 306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.