STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087335_04535Unannotated protein. (394 aa)    
Predicted Functional Partners:
GCA_002087335_04534
Unannotated protein.
 
 
  0.937
GCA_002087335_04533
Unannotated protein.
 
 
  0.901
GCA_002087335_04532
Unannotated protein.
 
  
  0.900
GCA_002087335_00053
Unannotated protein.
    
 0.878
GCA_002087335_00054
Unannotated protein.
    
 0.878
GCA_002087335_04782
Unannotated protein.
 
 
 0.842
GCA_002087335_04531
Unannotated protein.
    
 0.798
GCA_002087335_02617
Unannotated protein.
 
 
 0.797
GCA_002087335_03798
Unannotated protein.
  
  0.786
GCA_002087335_05176
Unannotated protein.
  
 0.777
Your Current Organism:
Pseudophaeobacter leonis
NCBI taxonomy Id: 1144477
Other names: CIP 110369, DSM 25627, P. leonis, Phaeobacter leonis, Phaeobacter leonis Gaboyer et al. 2013, Phaeobacter sp. 306, Pseudophaeobacter leonis (Gaboyer et al. 2013) Breider et al. 2014, UBOCC 3187, strain 306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.