STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087335_05187Unannotated protein. (466 aa)    
Predicted Functional Partners:
GCA_002087335_05188
Unannotated protein.
     0.992
GCA_002087335_05180
Unannotated protein.
 
 0.984
GCA_002087335_05182
Unannotated protein.
 
 
 0.969
GCA_002087335_05181
Unannotated protein.
 
 
 0.962
GCA_002087335_05186
Unannotated protein.
 
  0.956
GCA_002087335_05185
Unannotated protein.
 
 
  0.924
GCA_002087335_01921
Unannotated protein.
 
 0.909
GCA_002087335_05184
Unannotated protein.
 
     0.908
GCA_002087335_01922
Unannotated protein.
 
 0.884
GCA_002087335_04630
Unannotated protein.
  
 0.884
Your Current Organism:
Pseudophaeobacter leonis
NCBI taxonomy Id: 1144477
Other names: CIP 110369, DSM 25627, P. leonis, Phaeobacter leonis, Phaeobacter leonis Gaboyer et al. 2013, Phaeobacter sp. 306, Pseudophaeobacter leonis (Gaboyer et al. 2013) Breider et al. 2014, UBOCC 3187, strain 306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.