STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087295_03312Unannotated protein. (70 aa)    
Predicted Functional Partners:
GCA_002087295_03311
Unannotated protein.
 
     0.880
GCA_002087295_04012
Unannotated protein.
    
  0.861
GCA_002087295_00461
Unannotated protein.
  
 
  0.801
GCA_002087295_00464
Unannotated protein.
   
 
  0.786
GCA_002087295_00465
Unannotated protein.
  
 
  0.786
GCA_002087295_02360
Unannotated protein.
  
 
 0.783
GCA_002087295_02361
Unannotated protein.
  
 
 0.783
GCA_002087295_02362
Unannotated protein.
  
 
 0.783
GCA_002087295_02363
Unannotated protein.
  
 
 0.783
GCA_002087295_00280
Unannotated protein.
   
 0.750
Your Current Organism:
Halomonas lionensis
NCBI taxonomy Id: 1144478
Other names: CIP 110370, DSM 25632, H. lionensis, Halomonas sp. RHS90, UBOCC 3186, strain RHS90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.