STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002087295_04090Unannotated protein. (46 aa)    
Predicted Functional Partners:
GCA_002087295_04313
Unannotated protein.
  
 0.966
GCA_002087295_01170
Unannotated protein.
  
 0.963
GCA_002087295_04301
Unannotated protein.
  
 
 0.960
GCA_002087295_04100
Unannotated protein.
  
 
 0.959
GCA_002087295_04302
Unannotated protein.
  
   0.958
GCA_002087295_04305
Unannotated protein.
  
 
 0.958
GCA_002087295_04306
Unannotated protein.
  
   0.957
GCA_002087295_04316
Unannotated protein.
  
 
 0.957
GCA_002087295_04307
Unannotated protein.
  
   0.956
GCA_002087295_04312
Unannotated protein.
  
 
 0.956
Your Current Organism:
Halomonas lionensis
NCBI taxonomy Id: 1144478
Other names: CIP 110370, DSM 25632, H. lionensis, Halomonas sp. RHS90, UBOCC 3186, strain RHS90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.