STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ91804.1Predicted kinase, aminoglycoside phosphotransferase (APT) family. (308 aa)    
Predicted Functional Partners:
SEJ91819.1
Hypothetical protein.
 
     0.828
SEI63492.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
   
 
 0.620
SEJ75948.1
Helix-turn-helix domain-containing protein.
  
     0.613
SEJ75963.1
Protein of unknown function.
  
     0.570
SEJ12250.1
Protein of unknown function.
  
   0.540
SEJ98634.1
Helix-turn-helix domain-containing protein.
  
     0.532
SEI59582.1
Hypothetical protein.
  
     0.531
SEK00133.1
Hypothetical protein.
  
     0.524
SEJ28653.1
Hypothetical protein.
  
     0.523
SEJ89407.1
Protein of unknown function.
  
     0.512
Your Current Organism:
Xiangella phaseoli
NCBI taxonomy Id: 1144548
Other names: CGMCC 4.7038, DSM 45730, Jishengella sp. NEAU-J5, X. phaseoli, Xiangella phaseoli Wang et al. 2013, strain NEAU-J5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.