node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOE50321.1 | AOE50368.1 | KS2013_1611 | KS2013_1658 | RNA-binding protein; Pfam:pfam00076 RNA recognition motif. | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | 0.771 |
AOE50321.1 | rpoB | KS2013_1611 | KS2013_1994 | RNA-binding protein; Pfam:pfam00076 RNA recognition motif. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.705 |
AOE50321.1 | rpoZ | KS2013_1611 | KS2013_190 | RNA-binding protein; Pfam:pfam00076 RNA recognition motif. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.716 |
AOE50368.1 | AOE50321.1 | KS2013_1658 | KS2013_1611 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | RNA-binding protein; Pfam:pfam00076 RNA recognition motif. | 0.771 |
AOE50368.1 | rplS | KS2013_1658 | KS2013_1550 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.636 |
AOE50368.1 | rplT | KS2013_1658 | KS2013_780 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.631 |
AOE50368.1 | rpmA | KS2013_1658 | KS2013_1397 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | Pfam:pfam01016 Ribosomal L27 protein; Belongs to the bacterial ribosomal protein bL27 family. | 0.628 |
AOE50368.1 | rpoB | KS2013_1658 | KS2013_1994 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.591 |
AOE50368.1 | rpoZ | KS2013_1658 | KS2013_190 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.607 |
AOE50368.1 | rpsB | KS2013_1658 | KS2013_1654 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | Pfam:pfam00318 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.638 |
AOE50368.1 | rpsE | KS2013_1658 | KS2013_1968 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.604 |
AOE50368.1 | rpsL | KS2013_1658 | KS2013_1992 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.605 |
AOE50368.1 | rpsQ | KS2013_1658 | KS2013_1976 | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.592 |
rplS | AOE50368.1 | KS2013_1550 | KS2013_1658 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Pfam:pfam00313 'Cold-shock' DNA-binding domain. | 0.636 |
rplS | rplT | KS2013_1550 | KS2013_780 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.992 |
rplS | rpmA | KS2013_1550 | KS2013_1397 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Pfam:pfam01016 Ribosomal L27 protein; Belongs to the bacterial ribosomal protein bL27 family. | 0.995 |
rplS | rpoB | KS2013_1550 | KS2013_1994 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.895 |
rplS | rpoZ | KS2013_1550 | KS2013_190 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.579 |
rplS | rpsB | KS2013_1550 | KS2013_1654 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Pfam:pfam00318 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.992 |
rplS | rpsE | KS2013_1550 | KS2013_1968 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.985 |