Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOE49009.1 | AOE49010.1 | KS2013_282 | KS2013_283 | XRE family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix. | Hypothetical protein. | 0.793 |
AOE49009.1 | AOE49011.1 | KS2013_282 | KS2013_284 | XRE family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix. | Pfam:pfam03992 Antibiotic biosynthesis monooxygenase. | 0.483 |
AOE49009.1 | dsbB | KS2013_282 | KS2013_285 | XRE family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix. | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.444 |
AOE49010.1 | AOE49009.1 | KS2013_283 | KS2013_282 | Hypothetical protein. | XRE family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix. | 0.793 |
AOE49010.1 | AOE49011.1 | KS2013_283 | KS2013_284 | Hypothetical protein. | Pfam:pfam03992 Antibiotic biosynthesis monooxygenase. | 0.483 |
AOE49010.1 | dsbB | KS2013_283 | KS2013_285 | Hypothetical protein. | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.444 |
AOE49011.1 | AOE49009.1 | KS2013_284 | KS2013_282 | Pfam:pfam03992 Antibiotic biosynthesis monooxygenase. | XRE family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix. | 0.483 |
AOE49011.1 | AOE49010.1 | KS2013_284 | KS2013_283 | Pfam:pfam03992 Antibiotic biosynthesis monooxygenase. | Hypothetical protein. | 0.483 |
AOE49011.1 | dsbB | KS2013_284 | KS2013_285 | Pfam:pfam03992 Antibiotic biosynthesis monooxygenase. | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.705 |
dsbB | AOE49009.1 | KS2013_285 | KS2013_282 | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | XRE family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix. | 0.444 |
dsbB | AOE49010.1 | KS2013_285 | KS2013_283 | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Hypothetical protein. | 0.444 |
dsbB | AOE49011.1 | KS2013_285 | KS2013_284 | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Pfam:pfam03992 Antibiotic biosynthesis monooxygenase. | 0.705 |