STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOE49171.1Peptidase M14; Pfam:pfam00246 Zinc carboxypeptidase. (816 aa)    
Predicted Functional Partners:
AOE49172.1
Peptidase.
 
     0.917
AOE49579.1
Amidohydrolase; Pfam:pfam13594 Amidohydrolase.
  
     0.717
AOE50113.1
Signal peptide protein.
  
     0.660
AOE50714.1
Amidohydrolase; Pfam:pfam01979 Amidohydrolase family.
  
     0.654
AOE49227.1
Peptidase S9 prolyl oligopeptidase active site domain protein; Pfam:pfam00326 Prolyl oligopeptidase family.
  
     0.630
AOE49066.1
Xaa-Pro aminopeptidase; Pfam:pfam00557 Metallopeptidase family M24.
  
     0.628
AOE49957.1
Xaa-Pro dipeptidase; Pfam:pfam13147 Amidohydrolase.
  
     0.615
AOE49220.1
Putative ATP synthase F0, A subunit; Pfam:pfam05684 Protein of unknown function (DUF819).
  
     0.593
AOE49791.1
Hypothetical protein.
  
  
  0.588
AOE50931.1
WD40 domain protein beta Propeller; Pfam:pfam13594 Amidohydrolase.
  
     0.530
Your Current Organism:
Kangiella sediminilitoris
NCBI taxonomy Id: 1144748
Other names: CCUG 62217, K. sediminilitoris, KCTC 23892, Kangiella sediminilitoris Lee et al. 2013, Kangiella sp. BB-Mw22, strain BB-Mw22
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