STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI53682.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
SFJ54517.1
Protein of unknown function.
  
     0.540
SFI53709.1
Protein of unknown function.
       0.532
SFI56251.1
Hypothetical protein.
  
     0.528
SFI53743.1
Outer membrane receptor proteins, mostly Fe transport.
       0.520
SFJ35953.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.431
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
     0.429
SFJ57693.1
Protein involved in gliding motility GldC.
  
     0.424
SFI58875.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.403
Your Current Organism:
Olleya namhaensis
NCBI taxonomy Id: 1144750
Other names: CCUG 61507, DSM 28881, KCTC 23673, O. namhaensis, Olleya namhaensis Lee et al. 2013, Olleya sp. WT-MY15, strain WT-MY15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.