STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN23903.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (487 aa)    
Predicted Functional Partners:
AHN20936.1
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
AHN20698.1
Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.971
AHN21303.1
Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.963
AHN20937.1
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
AHN23824.1
Chemotaxis protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
AHN20935.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.942
AHN22327.1
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.930
AHN20939.1
Chemotaxis protein CheD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.917
AHN20926.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.835
AHN21582.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.785
Your Current Organism:
Lysinibacillus varians
NCBI taxonomy Id: 1145276
Other names: CCTCC M 2011307, CGMCC 1.12212, L. varians, Lysinibacillus sp. GY32, Lysinibacillus varians Zhu et al. 2014, NBRC 109424, strain GY32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.