STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN22212.1General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)    
Predicted Functional Partners:
AHN22932.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.767
AHN23321.1
Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.720
AHN21762.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.630
AHN23200.1
Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.623
AHN21406.1
Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.603
AHN23523.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.597
AHN21998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.581
AHN22126.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.575
AHN21428.1
NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
   
    0.572
AHN22259.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.572
Your Current Organism:
Lysinibacillus varians
NCBI taxonomy Id: 1145276
Other names: CCTCC M 2011307, CGMCC 1.12212, L. varians, Lysinibacillus sp. GY32, Lysinibacillus varians Zhu et al. 2014, NBRC 109424, strain GY32
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