STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN23229.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)    
Predicted Functional Partners:
AHN20597.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.818
AHN23228.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.810
AHN23202.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
AHN23049.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
AHN23319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
AHN23230.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
AHN21076.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.560
AHN23318.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.538
AHN22141.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.501
AHN22743.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
Your Current Organism:
Lysinibacillus varians
NCBI taxonomy Id: 1145276
Other names: CCTCC M 2011307, CGMCC 1.12212, L. varians, Lysinibacillus sp. GY32, Lysinibacillus varians Zhu et al. 2014, NBRC 109424, strain GY32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.