STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO0121Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (254 aa)    
Predicted Functional Partners:
BRADO1538
Putative ABC transporter (ATP-binding/permease protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.703
BRADO0122
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.587
gltJ
Glutamate/aspartate ABC transporter (permease protein); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.581
gltK
Glutamate/aspartate ABC transporter (permease protein); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.565
gltL
Glutamate/aspartate ABC transporter (ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.522
BRADO3487
Putative amino acid transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.513
BRADO3910
Putative amino acid transport protein, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.488
BRADO5485
Putative cytochrome c protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
  
 0.468
BRADO3911
Putative amino acid ABC transport, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.451
BRADO5543
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.445
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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