STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BRADO0542Putative efflux pump protein (HlyD domain), EmrA-FarA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (385 aa)    
Predicted Functional Partners:
BRADO0541
Putative drug resistance transporter, EmrB-FarB-QacA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the major facilitator superfamily.
 
 
 0.945
BRADO5120
Putative Multidrug resistance protein, emrB-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the major facilitator superfamily.
 
 
 0.862
BRADO5673
Putative multidrug resistance protein B (drug efflux transporter, EmrB-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the major facilitator superfamily.
 
 
 0.853
BRADO6167
Putative transport protein (permease); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.846
BRADO0149
Putative Multidrug resistance protein (drug efflux transporter, EmrB-like) (MFS superfamily); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the major facilitator superfamily.
 
 
 0.844
BRADO0543
Putative transcriptional regulator, MarR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
  
 0.839
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
  
 0.763
BRADO3905
Putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.748
BRADO5684
Putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.696
BRADO4543
Putative transport protein (MFS family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.685
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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