node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRADO0585 | BRADO0586 | BRADO0585 | BRADO0586 | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.516 |
BRADO0585 | BRADO1030 | BRADO0585 | BRADO1030 | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | 0.472 |
BRADO0585 | BRADO3233 | BRADO0585 | BRADO3233 | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | 0.466 |
BRADO0585 | BRADO3549 | BRADO0585 | BRADO3549 | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | 0.483 |
BRADO0585 | dapF | BRADO0585 | BRADO0383 | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.470 |
BRADO0585 | nnrE | BRADO0585 | BRADO4203 | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.842 |
BRADO0585 | rnr | BRADO0585 | BRADO4509 | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.575 |
BRADO0585 | rph | BRADO0585 | BRADO0173 | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | RNase PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.479 |
BRADO0586 | BRADO0585 | BRADO0586 | BRADO0585 | Hypothetical protein; No homology to any previously reported sequences. | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.516 |
BRADO1030 | BRADO0585 | BRADO1030 | BRADO0585 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.472 |
BRADO1030 | nnrE | BRADO1030 | BRADO4203 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.846 |
BRADO1030 | rnr | BRADO1030 | BRADO4509 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.425 |
BRADO1030 | rph | BRADO1030 | BRADO0173 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | RNase PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.568 |
BRADO3233 | BRADO0585 | BRADO3233 | BRADO0585 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.466 |
BRADO3233 | nnrE | BRADO3233 | BRADO4203 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.846 |
BRADO3233 | rnr | BRADO3233 | BRADO4509 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.425 |
BRADO3233 | rph | BRADO3233 | BRADO0173 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | RNase PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.568 |
BRADO3549 | BRADO0585 | BRADO3549 | BRADO0585 | Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Putative mutator protein mutT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.483 |
BRADO3549 | nnrE | BRADO3549 | BRADO4203 | Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.846 |
BRADO3549 | rnr | BRADO3549 | BRADO4509 | Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.425 |