STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO0962Putative 3-hydroxybutyryl-CoA dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (266 aa)    
Predicted Functional Partners:
BRADO0963
Putative feruloyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.904
BRADO0716
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
  0.900
BRADO6625
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
  0.900
Hadh
3-hydroxyacyl-CoA dehydrogenase (short-chain); Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.862
BRADO1848
Putative thiosulfate sulfurtransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.823
ahcY
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase); May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.821
metH
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.812
metC-2
O-acetylhomoserine/O-acetylserine sulfhydrylase; Function of strongly homologous gene; enzyme.
   
 
 0.805
BRADO3525
Putative cystathionine beta-lyase (CBL; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
 
 0.803
metC
Cystathionine beta-lyase, PLP-dependent (beta-cystathionase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.803
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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