STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO1509Putative O-linked N-acetylglucosamine transferase, SPINDLY family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (741 aa)    
Predicted Functional Partners:
BRADO6978
Putative Peptidase, Caspase-like domain and TPR repeats; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.585
BRADO0679
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.562
BRADO5241
Conserved hypothetical protein with a TPR motif and a caspase domain; Homologs of previously reported genes of unknown function.
 
 
 0.493
BRADO2078
Hypothetical protein; No homology to any previously reported sequences.
 
 0.473
BRADO0666
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
0.411
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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