Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BRADO1925Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (794 aa)    
Predicted Functional Partners:
BRADO4012
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
   0.695
BRADO4013
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.645
mxaF
Methanol dehydrogenase large subunit homolog; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.632
Mox
Mox; Function of strongly homologous gene; carrier.
  
   
 0.631
metH
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.590
BRADO1959
Putative outer membrane hemin/siderophore receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
 0.571
BRADO5463
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
   0.564
BRADO1290
Hypothetical protein; No homology to any previously reported sequences.
  
 
 
 0.557
BRADO1050
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.548
BRADO1172
Putative TonB protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
 
 0.548
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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