STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRADO1985Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (301 aa)    
Predicted Functional Partners:
cheA-2
Chemotaxis protein cheA; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.954
cheA-4
Chemotaxis protein cheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 
 0.954
BRADO2290
Putative chemotaxis protein methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
 
 0.873
cheA
Chemotaxis protein cheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
 
 0.780
cheA-3
Chemotaxis protein cheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
 
 0.780
BRADO2943
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.766
BRADO4629
Putative flagellar biosynthesis protein FlhB (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    0.754
BRADO3775
Putative acid-CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.750
BRADO4228
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.746
BRADO2713
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.743
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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