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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2108Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (378 aa)    
Predicted Functional Partners:
BRADO2107
Putative hydantoinase A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    0.995
BRADO2110
Putative spermidine/putrescine-binding periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.813
BRADO2111
Putative ABC spermidine/putrescine transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.701
potA
Putative sperimidine/putrescine transport protein (ABC superfamily, atp_bind); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
       0.658
BRADO2113
Putative transcriptional regulatory protein, IclR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.611
BRADO2112
Putative ABC spermidine/putrescine transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.601
BRADO3230
Hydantoin utilization protein A; Function of strongly homologous gene; enzyme.
 
    0.424
hyuA-2
N-methylhydantoinase A (Hydantoin utilization protein A); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.402
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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