STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potAPutative sperimidine/putrescine transport protein (ABC superfamily, atp_bind); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (362 aa)    
Predicted Functional Partners:
BRADO2111
Putative ABC spermidine/putrescine transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.961
BRADO2112
Putative ABC spermidine/putrescine transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.949
BRADO2110
Putative spermidine/putrescine-binding periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.894
BRADO1543
Putative ABC transporter (permease protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.871
BRADO0872
Putative ABC transporter (permease protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.870
potH
Putrescine transport protein (ABC superfamily, membrane); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.870
BRADO7091
Putative spermidine/putrescine ABC transporter (permease protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.870
BRADO1548
Putative ABC transporter (permease protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.863
potI
Putrescine transport protein (ABC superfamily, membrane); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.854
BRADO1540
Putative ABC transporter (permease protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.852
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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