STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2114Putative Isoquinoline 1-oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (1179 aa)    
Predicted Functional Partners:
BRADO2115
Putative isoquinoline 1-oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 0.994
BRADO3161
Putative oxidoreductase subunit protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 0.971
BRADO1977
Cytochrome b/c1 [Contains: Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.969
BRADO2116
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
  0.955
BRADO3160
Putative oxidoreductase subunit protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
0.919
pncB
Nicotinate phosphoribosyltransferase (NAPRTase); Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
  0.912
pncA
Nicotinamidase/pyrazinamidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
  0.904
ccoO
Cytochrome-c oxidase fixO chain; Function of strongly homologous gene; carrier.
  
 
 0.757
BRADO1976
Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) (RISP); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.747
BRADO2438
Cytochrome c oxidase polypeptide I; Function of strongly homologous gene; carrier; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.739
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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