STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BRADO2123Putative transcriptional regulatory protein, MarR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (171 aa)    
Predicted Functional Partners:
BRADO2120
Putative high-affinity branched-chain amino acid transport system permease protein livM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
     0.894
livG-2
High-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind); Function of strongly homologous gene; transporter.
 
     0.842
BRADO2117
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.833
BRADO2118
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.827
BRADO2116
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.824
livF-3
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.817
BRADO2119
Putative branched-chain amino acid ABC transporter, periplasmic substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.791
BRADO2124
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.629
BRADO5551
Putative glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.464
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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