STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dkgB2,5-diketo-D-gluconate reductase B; Function of strongly homologous gene; enzyme. (273 aa)    
Predicted Functional Partners:
BRADO6605
Putative oxidoreductase (aldo/keto reductase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.838
BRADO0841
Putative oxidoreductase, aldo/keto reductase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.768
BRADO0489
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.765
BRADO2202
Putative aldo/keto reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.718
BRADO4754
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.712
yeaG
Conserved hypothetical protein (YeaG); Homologs of previously reported genes of unknown function.
   
    0.712
BRADO0068
Putative oxidoreductase, aldo/keto reductase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.697
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.662
otsB
Trehalose-phosphatase (Trehalose 6-phosphate phosphatase) (TPP); Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
   0.633
BRADO3166
Putative NADP-dependent oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.631
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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