STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2139ABC transporter periplasmic substrate binding protein; Function of strongly homologous gene; putative transporter. (401 aa)    
Predicted Functional Partners:
BRADO3734
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the binding-protein-dependent transport system permease family.
 
    0.828
BRADO3730
Putative branched-chain amino acid transport system ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    0.824
BRADO3733
Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family.
 
    0.823
BRADO3731
Putative branched-chain amino acid transport system ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    0.804
BRADO2120
Putative high-affinity branched-chain amino acid transport system permease protein livM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.636
BRADO4581
Putative branched-chain amino acid ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family.
 
    0.596
BRADO0970
ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter); Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.571
BRADO2653
Putative Branched-chain amino acid ABC tranpsorter, ATP binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.571
alkK
acyl-CoA synthetase; Function of strongly homologous gene; enzyme.
       0.463
BRADO2138
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.429
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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