STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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BRADO2168Putative Monomeric sarcosine oxidase (MSOX); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (394 aa)    
Predicted Functional Partners:
BRADO5277
Serine-glyoxylate aminotransferase; Function of strongly homologous gene; enzyme.
  
 
 0.929
BRADO5278
Serine-glyoxylate aminotransferase; Function of strongly homologous gene; enzyme.
  
 
 0.929
BRADO6985
Putative Aminotransferase, class V; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.929
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.913
gcvP
Glycine cleavage system P-protein (glycine dehydrogenase); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.913
BRADO2796
Putative L-allo-threonine aldolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.906
hemA
5-aminolevulinic acid synthase (ALAS); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.905
hemA-2
5-aminolevulinate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.905
hemA-3
5-aminolevulinate synthase (5-aminolevulinic acid synthase) (Delta-aminolevulinate synthase); Function of strongly homologous gene; enzyme.
  
 
 0.905
hemA-4
5-aminolevulinic acid synthase (ALAS); Function of strongly homologous gene; enzyme.
  
 
 0.905
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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