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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2168Putative Monomeric sarcosine oxidase (MSOX); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (394 aa)    
Predicted Functional Partners:
soxA
Sarcosine oxidase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.913
BRADO2169
Putative enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.753
BRADO1551
Oxidoreductase (Pyridine nucleotide-disulphide subunit); Function of strongly homologous gene; enzyme.
  
 
 0.632
soxD
Sarcosine oxidase, delta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.592
gcvT
Glycine cleavage system T-protein (aminomethyltransferase); Function of strongly homologous gene; enzyme.
  
 
 0.555
BRADO3301
Putative alanine racemase (alr); Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.502
soxG
Sarcosine oxidase, gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.495
katN
Non-heme manganese-containing catalase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.408
BRADO0663
Hypothetical protein; No homology to any previously reported sequences.
 
     0.405
BRADO2170
Hypothetical protein; No homology to any previously reported sequences.
       0.403
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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