STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2190Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (165 aa)    
Predicted Functional Partners:
BRADO4941
Hypothetical protein; No homology to any previously reported sequences.
  
     0.762
BRADO2191
Putative general secretion pathway protein D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
 0.729
BRADO4079
Putative Exopolysaccharide regulatory protein exoR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.729
flgC
Flagellar basal-body rod protein FlgC (cell-proximal rod protein); Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family.
   
 
 0.461
BRADO6624
Putative flagellar basal-body rod protein (flgC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the flagella basal body rod proteins family.
   
 
 0.457
BRADO2189
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.454
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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