STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BRADO2191Putative general secretion pathway protein D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (778 aa)    
Predicted Functional Partners:
gspD
General secretion pathway protein D; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
  
 
0.904
BRADO1291
Putative general secretion pathway protein D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 
0.903
BRADO2196
Putative general secretion pathway protein K; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
 0.880
BRADO2193
Putative general secretion pathway protein H; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.878
gspG
General secretion pathway protein G; Function of strongly homologous gene; transporter.
 
  
 0.826
BRADO1295
Putative General secretion pathway protein G precursor (PilD-dependent protein pddA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.825
gspF
General secretion pathway protein F; Function of strongly homologous gene; transporter.
 
  
 0.816
BRADO1294
Putative general secretion pathway protein F; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.814
BRADO1300
Putative General secretion pathway protein L; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.805
BRADO6341
Putative General secretion pathway protein L, GspL; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.805
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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