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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2197Hypothetical protein; No homology to any previously reported sequences. (419 aa)    
Predicted Functional Partners:
BRADO4231
Putative Bacterial sugar transferase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.796
BRADO2198
Hypothetical protein; Doubtful CDS.
       0.609
manC
Mannose-1-phosphate guanyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.567
BRADO2078
Hypothetical protein; No homology to any previously reported sequences.
  
  
 0.456
BRADO7024
Hypothetical protein, putative glycosyl transferase; No homology to any previously reported sequences.
  
  
 0.448
BRADO7033
Putative Glycosyl transferase, group 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.448
BRADO5199
Putative polysaccharide biosynthesis protein (capD-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.419
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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