STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2249Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (353 aa)    
Predicted Functional Partners:
BRADO2250
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.953
BRADO2251
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    
0.835
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
  
 0.763
BRADO2869
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.562
BRADO3905
Putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.558
BRADO4656
Putative component of multidrug efflux pump, mdtA-Like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.544
BRADO2662
Putative outer TolC membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 
 0.542
BRADO3884
Putative outer membrane protein tolC precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 
 0.541
BRADO2385
Putative outer membrane efflux protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.535
BRADO5684
Putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.526
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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