STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2256Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (273 aa)    
Predicted Functional Partners:
BRADO2257
Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
 0.956
BRADO1977
Cytochrome b/c1 [Contains: Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.912
BRADO2261
Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
    
0.811
BRADO2260
Putative Cytochrome-c oxidase subunit I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.789
BRADO2259
Putative cytochrome c oxidase subunit II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.780
BRADO1976
Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) (RISP); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.712
BRADO2258
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.712
ccoO
Cytochrome-c oxidase fixO chain; Function of strongly homologous gene; carrier.
  
 
 0.700
BRADO2438
Cytochrome c oxidase polypeptide I; Function of strongly homologous gene; carrier; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.661
cycG
Diheme cytochrome c-type; Function of homologous gene experimentally demonstrated in an other organism; carrier.
 
 0.637
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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