STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2708Putative sensor histidine kinase with a PAS domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (610 aa)    
Predicted Functional Partners:
BRADO4521
Putative response regulator in two-component regulatory system (CheY-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 0.990
pleD
Response regulator PleD (with diguanylate cyclase and response regulator receiver domains); Function of homologous gene experimentally demonstrated in an other organism; regulator.
 0.989
BRADO3946
Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
0.981
BRADO5752
Putative sensor histidine kinase with multiple PAS/PAC and a response regulator receiver domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
0.968
BRADO3399
Putative sensor histidine kinase with two PAS and a response regulator receiver domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
0.931
BRADO7010
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 
0.921
BRADO4689
Putative sensor histidine kinase with a response regulator receiver domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
0.920
BRADO1831
Putative Response regulator, putative serine phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.895
BRADO4688
Putative two-component system sensor protein with Hpt domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.889
BRADO6899
Function of strongly homologous gene; regulator.
 
 0.871
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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