STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO4965Conserved hypothetical protein with CBS domain; Homologs of previously reported genes of unknown function. (139 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase); Catalyzes the synthesis of GMP from XMP.
  
 
 0.797
BRADO2416
Conserved hypothetical protein with 2 CBS domains; Homologs of previously reported genes of unknown function.
 
     0.760
BRADO0970
ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter); Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
    0.577
BRADO2653
Putative Branched-chain amino acid ABC tranpsorter, ATP binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family.
  
    0.577
htpG
Chaperone protein htpG (Heat shock protein htpG) (High temperature protein G); Molecular chaperone. Has ATPase activity.
   
 0.568
oxlT-2
Putative oxalate/formate antiporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.501
BRADO4966
Putative NADPH quinone oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     
 0.497
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
  
 0.489
BRADO5515
Putative NADH-dependent flavin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   0.483
BRADO2133
Putative GTP cyclohydrolase II, riboflavin biosynthesis; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
  
  
 0.482
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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