STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRADO5000Putative transcriptional regulatory protein, XRE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (271 aa)    
Predicted Functional Partners:
BRADO5003
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.853
BRADO4999
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative enzyme.
       0.653
BRADO5001
Hypothetical protein; Doubtful CDS.
       0.572
BRADO5002
Hypothetical protein; No homology to any previously reported sequences.
       0.572
BRADO0019
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.470
BRADO1418
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.443
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.