STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
BRADO5015Putative dehydratase with a MaoC-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (147 aa)    
Predicted Functional Partners:
fumA
Fumarase A (fumarate hydratase class I); Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.693
BRADO1380
Catalase, homologous to the Protein srpA precursor; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.654
pimF
Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.514
BRADO6723
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.514
paaB
Phenylacetic acid degradation protein paaB; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
 
  
 0.463
BRADO5014
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.461
paaD
Phenylacetic acid degradation protein paaD; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.458
BRADO2179
Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.418
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
  
 0.408
BRADO1442
acyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.408
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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