STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO6139Putative ybaK-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (155 aa)    
Predicted Functional Partners:
BRADO6138
Putative Amidohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.770
fliE
Flagellar hook-basal body complex protein FliE; Function of strongly homologous gene; structure.
    
   0.552
fliN
Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
    
   0.552
BRADO1382
Hypothetical protein; No homology to any previously reported sequences.
    
   0.443
BRADO4885
Putative basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.443
BRADO5897
Putative flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.443
BRADO2290
Putative chemotaxis protein methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
   
   0.437
rpmJ
50S ribosomal protein L36; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL36 family.
       0.420
BRADO5037
Putative flagellar basal-body rod protein (flgF or flgG); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structure; Belongs to the flagella basal body rod proteins family.
    
   0.412
flgG
Flagellar basal-body rod protein flgG (Distal rod protein); Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family.
    
   0.412
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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