STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO6871Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (101 aa)    
Predicted Functional Partners:
BRADO6870
Conserved hypothetical protein with CBS domain; Homologs of previously reported genes of unknown function.
  
    0.746
ccoO
Cytochrome-c oxidase fixO chain; Function of strongly homologous gene; carrier.
  
 
 0.682
BRADO2438
Cytochrome c oxidase polypeptide I; Function of strongly homologous gene; carrier; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.632
BRADO1977
Cytochrome b/c1 [Contains: Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
  
 0.601
BRADO1551
Oxidoreductase (Pyridine nucleotide-disulphide subunit); Function of strongly homologous gene; enzyme.
   
 
 0.566
soxA
Sarcosine oxidase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.566
BRADO6869
Putative AMP-dependent synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.513
BRADO6873
Putative two-component sensor histidine kinase with PAS/PAC domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.401
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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