STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO7035Putative HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (458 aa)    
Predicted Functional Partners:
BRADO7036
Putative Toxin secretion ABC transporter (ATP-binding and membrane protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.976
BRADO2764
Toxin secretion ABC transporter (ATP-binding and membrane protein); Function of strongly homologous gene; transporter.
 
 0.884
BRADO6201
Toxin secretion ABC transporter (ATP-binding and membrane protein); Function of strongly homologous gene; transporter.
 
 
 0.882
BRADO6926
Toxin secretion ABC transporter (ATP-binding and membrane protein); Function of strongly homologous gene; transporter.
 
 
 0.881
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.763
BRADO7034
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.742
BRADO7039
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.734
BRADO7040
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.725
BRADO0911
Putative ABC transporter family, HlyB subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; membrane component.
  
 0.646
BRADO3376
Putative secretion ATP-binding protein (ABC-type transporter family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.634
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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