STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiFFormamidase (Formamide amidohydrolase); Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. (337 aa)    
Predicted Functional Partners:
gdh
Glutamate dehydrogenase (NAD(P)+) oxidoreductase protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.931
fmdA
Formamidase (formamide amidohydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.928
glnII
Glutamine synthetase II (Glutamate--ammonia ligase II) (GSII); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.907
glnA
Glutamine synthetase I (Glutamate--ammonia ligase I) (GSI); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.907
BRADO6656
Putative glutamine synthetase (glnA4-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the glutamine synthetase family.
    
 0.907
BRADO3793
Putative ferredoxin-nitrite reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.905
nifK
Nitrogenase molybdenum-iron protein beta chain, nifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
     
 0.902
nitA
Aliphatic nitrilase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.901
fdsA
Formate dehydrogenase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.901
nasD
Nitrite reductase [NAD(P)H], large subunit; Function of strongly homologous gene; enzyme.
     
  0.900
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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