Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OQD57566.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)    
Predicted Functional Partners:
OQD51815.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.960
OQD56811.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.944
OQD55229.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.942
BM536_001340
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
BM536_002800
ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
OQD57458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
OQD51675.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.846
OQD55172.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.823
BM536_032450
Polyketide synthase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.813
BM536_006230
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.811
Your Current Organism:
Streptomyces phaeoluteigriseus
NCBI taxonomy Id: 114686
Other names: DSM 41896, ISP 5182, NRRL ISP-5182, S. phaeoluteigriseus, Streptomyces phaeoluteigriseus Goodfellow et al. 2008, Streptomyces sp. NRRL 5182
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