STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQD55702.1CsbD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. (57 aa)    
Predicted Functional Partners:
OQD57129.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.704
OQD57571.1
PPOX class F420-dependent enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.665
OQD53033.1
Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.650
OQD57408.1
Dodecin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.625
tam
Trans-aconitate methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
       0.610
OQD56233.1
PPOX class F420-dependent enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.588
OQD56660.1
PPOX class F420-dependent enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.588
BM536_028640
TetR family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.588
BM536_016845
Phosphoglucomutase, alpha-D-glucose phosphate-specific; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.571
BM536_004345
Squalene synthase HpnC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.568
Your Current Organism:
Streptomyces phaeoluteigriseus
NCBI taxonomy Id: 114686
Other names: DSM 41896, ISP 5182, NRRL ISP-5182, S. phaeoluteigriseus, Streptomyces phaeoluteigriseus Goodfellow et al. 2008, Streptomyces sp. NRRL 5182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.