STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BM536_031185Class II aldolase/adducin family protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)    
Predicted Functional Partners:
OQD55462.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.590
OQD55109.1
Iron siderophore-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.590
BM536_020105
C4-dicarboxylate ABC transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.590
BM536_023555
Peroxidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.567
OQD52613.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
OQD54667.1
Toxic cation resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
OQD56180.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
OQD52755.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.431
Your Current Organism:
Streptomyces phaeoluteigriseus
NCBI taxonomy Id: 114686
Other names: DSM 41896, ISP 5182, NRRL ISP-5182, S. phaeoluteigriseus, Streptomyces phaeoluteigriseus Goodfellow et al. 2008, Streptomyces sp. NRRL 5182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.