STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLASA_2163Homologs of previously reported genes of unknown function. (68 aa)    
Predicted Functional Partners:
BLASA_2162
Cytotoxic translational repressor of toxin-antitoxin stability system, Putative toxin of TAS system; Function of strongly homologous gene; cell process.
       0.831
BLASA_2160
Homologs of previously reported genes of unknown function.
       0.773
BLASA_2161
Type I restriction enzyme R; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.773
BLASA_2164
Putative phage-related regulatory protein cII; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
       0.645
BLASA_2165
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.645
BLASA_2166
Putative Restriction modification system DNA specificity domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.601
BLASA_2167
Type I restriction-modification system methyltransferase subunit; Function of strongly homologous gene; enzyme.
       0.601
BLASA_2159
Putative Transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.574
Your Current Organism:
Blastococcus saxobsidens
NCBI taxonomy Id: 1146883
Other names: B. saxobsidens DD2, Blastococcus saxobsidens DD2, Blastococcus saxobsidens str. DD2, Blastococcus saxobsidens strain DD2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.